groverj3
Molecular Biologist who's learned enough Python and R to be dangerous. Currently employed at Entrada Therapeutics in Boston, MA.
Entrada TherapeuticsBoston, MA
Pinned Repositories
dotfiles
A place to store my linux dotfiles so I can quickly configure new systems.
Flex
The minimalist Pelican theme.
genomics_tools
General-purporse scripts I have written for working with sequencing data.
genomics_visualizations
A repository of code snippets and examples of genomics visualizations so you don't have to totally reinvent the wheel.
groverj3.github.io
Jeff's little corner of the web. Made with Pelican. Source code available on the "source" branch.
methylation_coge-tools
Scripts to process bs-seq analyses to be used with CoGe (genomevolution.org).
minimal_nextflow_samplesheet_example
A minimal RNAseq workflow, written in Nextflow, an example of using a samplesheet for metadata.
polyglot_jupyter_example
An example of setting up a minimal environment for both R and Python in a bioinformatics/data science Jupyter project.
shell_scripts
Scripts that are useful for working in the shell.
wgbs_snakemake
A Snakemake workflow to automate analysis of whole-genome bisulfite sequencing data.
groverj3's Repositories
groverj3/minimal_nextflow_samplesheet_example
A minimal RNAseq workflow, written in Nextflow, an example of using a samplesheet for metadata.
groverj3/wgbs_snakemake
A Snakemake workflow to automate analysis of whole-genome bisulfite sequencing data.
groverj3/genomics_visualizations
A repository of code snippets and examples of genomics visualizations so you don't have to totally reinvent the wheel.
groverj3/polyglot_jupyter_example
An example of setting up a minimal environment for both R and Python in a bioinformatics/data science Jupyter project.
groverj3/dotfiles
A place to store my linux dotfiles so I can quickly configure new systems.
groverj3/Flex
The minimalist Pelican theme.
groverj3/genomics_tools
General-purporse scripts I have written for working with sequencing data.
groverj3/groverj3.github.io
Jeff's little corner of the web. Made with Pelican. Source code available on the "source" branch.
groverj3/methylation_coge-tools
Scripts to process bs-seq analyses to be used with CoGe (genomevolution.org).
groverj3/shell_scripts
Scripts that are useful for working in the shell.
groverj3/small_rna_tools
Scripts specific to processing data from small RNA sequencing
groverj3/wgbs_tools
Scripts n'such for analysis of whole-genome bisulfite sequencing.
groverj3/volcano_rnaseq_shiny_example
An example using R shiny to create a web app that generates volcano plots.