/Root-Image-Analysis-Pipeline-Evaluation

Scripts and data for a paper describing a new method to evaluate root image analysis pipeline

Primary LanguageJava

DOI

Root-Image-Analysis-Pipeline-Evaluation

Scripts and data for a paper describing a new method to evaluate root image analysis pipeline

This repository contains resources for the paper entitiled:

Using a structural root model for an in-depth assessment of root image analysis pipeline

Guillaume Lobet, Iko Koevoets, Pierre Tocquin, Loïc Pagès and Claire Périlleux

Contents

  • 00_data: contains the raw data used for the analysis
  • 01_image_analysis: contains the scripts used for the generation of the image library. It contains the RIA-J scripts.
  • 02_data_analysis: contains the scripts used for the data analysis and the figures of the paper.