gurayerus

Pinned Repositories

AIBIL_Workflows
A collection of Snakemake workflows for AIBIL image processing and analysis workflows
Language:Python21
DeepMRSeg
Language:Python00
DeepMRSeg-Models
00
DLICV
A Deep Learning segmentation model specifically customized and trained for segmenting intra-cranial volume (ICV) from T1-weighted MRI scans
Language:Python20
MLSeminarSandbox
Language:Python00
MRIReport
Language:HTML00
NiChart
A GUI tool for visualization and analysis of quantitative neuroimaging data. The tool provides users multiple plugins to view/plot multiple datasets, filter and merge them, and apply pre-trained models on the datasets to derive new variables.
Language:Python22
NiChart_InitialData_PRIVATE
Initial data colllection for NiChart
Language:Shell10
NiChart_MRISnapshot
A QC tool for verification of datasets with MRI images and derived masks
Language:Python10
NiChart_Study_ClinData_PRIVATE
Scripts for consolidation of clinical data for each study
Language:Shell10

gurayerus's Repositories

gurayerus/AIBIL_Workflows
A collection of Snakemake workflows for AIBIL image processing and analysis workflows
Language:Python21
gurayerus/DLICV
A Deep Learning segmentation model specifically customized and trained for segmenting intra-cranial volume (ICV) from T1-weighted MRI scans
Language:Python20
gurayerus/NiChart
A GUI tool for visualization and analysis of quantitative neuroimaging data. The tool provides users multiple plugins to view/plot multiple datasets, filter and merge them, and apply pre-trained models on the datasets to derive new variables.
Language:Python22
gurayerus/NiChart_InitialData_PRIVATE
Initial data colllection for NiChart
Language:Shell10
gurayerus/NiChart_MRISnapshot
A QC tool for verification of datasets with MRI images and derived masks
Language:Python10
gurayerus/NiChart_Study_ClinData_PRIVATE
Scripts for consolidation of clinical data for each study
Language:Shell10
gurayerus/DeepMRSeg
Language:Python00
gurayerus/DeepMRSeg-Models
00
gurayerus/MLSeminarSandbox
Language:Python00
gurayerus/MRIReport
Language:HTML00
gurayerus/NiBAx
A fork of NiBAx to propose a remake of few components of it
Language:Python
gurayerus/nichart-dash-prototype
Language:Python
gurayerus/NiChart_Centiles
Scripts for creation of centiles from sample data
Language:Python
gurayerus/NiChart_Engine
Language:HTML1
gurayerus/NiChart_Project
Neuro Imaging Chart of AI-based Imaging Biomarkers
gurayerus/NiChart_Website
The Landing page for the NiChart project
Language:JavaScript
gurayerus/NiChart_Workflows
Language:HTML
gurayerus/niCHARTPipelines
Language:Python
gurayerus/NiPlot
Language:Python
gurayerus/Papers
gurayerus/spare_score
Compute SPARE scores to detect characteristic feature patterns
Language:Python
gurayerus/tmp-deepmrseg-models
deepmrseg models saved as tmp