gwcbi/MetaOmicSet

Issues

• Validation for GenericOmicSet

  #2 opened 7 years ago by mlbendall
  2

• Power calculation

  #21 opened 7 years ago by mlbendall
  0

• Batch Effect correction

  #20 opened 7 years ago by mlbendall
  0

• Longitudinal, paired/multiple sampling

  #19 opened 7 years ago by mlbendall
  0

• stacked bar charts, area plots

  #18 opened 7 years ago by mlbendall
  0

• alpha and beta diversity

  #17 opened 7 years ago by mlbendall
  0

• multi-datatype covariance

  #16 opened 7 years ago by mlbendall
  0

• co-expression/co-abundance networks

  #15 opened 7 years ago by mlbendall
  0

• implement differential abundance test

  #14 opened 7 years ago by mlbendall
  0

• constructor for "phyloseq" files

  #8 opened 7 years ago by mriganktiwari
  1

• constructor for "pathoscope" files

  #7 opened 7 years ago by mriganktiwari
  1

• test data for kraken/centrifuge

  #10 opened 8 years ago by mlbendall
  0

• constructor for kraken/centrifuge input

  #9 opened 8 years ago by mlbendall
  0

• Subclass for MetagenomicSet

  #5 opened 8 years ago by mlbendall
  0

• Constructors for different inputs (eg., BIOM, phyloseq, pathoscope outputs, .tsv files)

  #4 opened 8 years ago by mriganktiwari
  0

• Functions for GenericOmicSet

  #3 opened 8 years ago by mlbendall
  0