Pinned Repositories
bedtools
A powerful toolset for genome arithmetic.
bedtools2
A powerful toolset for genome arithmetic.
Boulder_MS_DS_as_Field
Final Assignments
CellChat
R toolkit for inference and analysis of cell-cell communication from single-cell data
chip-seq-pipeline2
ENCODE ChIP-seq pipeline
COVID-19
Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
foundations-for-analytics-with-python
maftools
Summarize, Analyze and Visualize MAF files from TCGA or in house studies.
OrchestratingSingleCellAnalysis-release
An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
seurat
R toolkit for single cell genomics
gynecoloji's Repositories
gynecoloji/maftools
Summarize, Analyze and Visualize MAF files from TCGA or in house studies.
gynecoloji/OrchestratingSingleCellAnalysis-release
An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.
gynecoloji/seurat
R toolkit for single cell genomics
gynecoloji/bedtools
A powerful toolset for genome arithmetic.
gynecoloji/bedtools2
A powerful toolset for genome arithmetic.
gynecoloji/Boulder_MS_DS_as_Field
Final Assignments
gynecoloji/CellChat
R toolkit for inference and analysis of cell-cell communication from single-cell data
gynecoloji/chip-seq-pipeline2
ENCODE ChIP-seq pipeline
gynecoloji/COVID-19
Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
gynecoloji/foundations-for-analytics-with-python
gynecoloji/gatk
Official code repository for GATK versions 4 and up
gynecoloji/git
gynecoloji/J_cluster
gynecoloji/jmzeng1314-5years-summarize
gynecoloji/Painless-R-compilation-and-installation-on-Ubuntu
recipe for all dependencies of R on Ubuntu
gynecoloji/project
gynecoloji/R_TCGAbiolinks_gynecoloji
gynecoloji_modified_TCGAbiolinks_codes
gynecoloji/RCookBook
R CookBook examples
gynecoloji/RNA-seq
gynecoloji/RNA-seq2
gynecoloji/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
gynecoloji/scFEA
single cell Flux Estimation Analysis (scFEA) Try the below web server!
gynecoloji/sva-devel
gynecoloji/TCGAbiolinks
TCGAbiolinks
gynecoloji/TCGAsurvival
Scripts to analyze TCGA data