Pinned Repositories
chip_downsampling
ChIPseq
Automation of ChIP-seq Workflow (v0.1.0)
enaBrowserTools
A collection of scripts to assist in the retrieval of data from the ENA Browser
fetchngs
Pipeline to fetch metadata and raw FastQ files from public databases
foofactors
Gabe Makes a Toy Package
gostripes_parallel
Harlow_etal_2021
marge
API for HOMER in R for Genomic Analysis using Tidy Conventions
med_abundance
mediator
Miscellaneous Mediator analyses
gzentner's Repositories
gzentner/chip_downsampling
gzentner/ChIPseq
Automation of ChIP-seq Workflow (v0.1.0)
gzentner/enaBrowserTools
A collection of scripts to assist in the retrieval of data from the ENA Browser
gzentner/fetchngs
Pipeline to fetch metadata and raw FastQ files from public databases
gzentner/foofactors
Gabe Makes a Toy Package
gzentner/gostripes_parallel
gzentner/Harlow_etal_2021
gzentner/marge
API for HOMER in R for Genomic Analysis using Tidy Conventions
gzentner/med_abundance
gzentner/mediator
Miscellaneous Mediator analyses
gzentner/RNAseq
Standard RNA-seq Workflow
gzentner/rnaseq-1
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
gzentner/sequence_color_plot
gzentner/shiny
Playing with Shiny
gzentner/TSRexploreR
gzentner/yeast_cage
Analysis of yeast CAGE data with TSRexploreR
gzentner/ZentTools
gzentner/ZentUtils
gzentner/zf_shifting
Analysis of zebrafish CAGE data with TSRexploreR