/Mouse-cular_Denervation

Transcriptional and epigenetic signature of muscle tissue cells linked to atrophy

Primary LanguagePython

Mouse-Cular_Denervation

Unravelling the molecular changes of fast glycolytic muscle fibers during denervation

  • snRNA-Seq_Analysis : This code allows an analysis and the integration of snRNA-Seq data sets.
  • snMultiome_Analysis : This code allows an analysis and the integration of snRNA-Seq & snATAC-Seq data sets.
  • Automatic_annotation : This code takes as input a csv with the markers for each cluster and returns a tsv with, for each gene in each cluster, the cell type where the gene is expressed according to the Human Protein Atlas.