This script was created to analyze gel electrophoresis images.
Input: Gel electrophoresis image. Outputs: Distance matrix; Dendogram(s); Dendograms in text file nwk format; Created by: Cindy Ulloa & Hector Ruiz; Universidad de los Andes, Bogotá, Colombia
INSTRUCTIONS:
- Open and run script in Matlab(R)
- Select gel image file
- Select the observed band color.
- Crop the image to the area where bands are located.
- Draw a rectangle over the first well using the mouse.
- Select the option to add more lanes* At least two lanes must be selected; Rectangle must cover desired lane width; Lane height is automatically selected.
- When all lanes are selected choose the option "Done".
- Select the methods with which you wish to generate dendograms.