/caffe_nd_sense_segmentation

Caffe: a fast open framework for deep learning.

Primary LanguageC++OtherNOASSERTION

Caffe for 3D image segmentation

This version of caffe was modified for 3D image Segmenation.

  • DataPatch layer allows to load hd5 valume from which it randomly crop 3d Patch data and corresponding 3d label to feed to networks.
  • Support 3D pooling
  • Class weights are autmatically balanced in softmaxloss layer for imbalanced classes.
  • Perform either entire 3D volume prediction or slice by slice prediction in testing phase.

Caffe

Build Status License

Caffe is a deep learning framework made with expression, speed, and modularity in mind. It is developed by the Berkeley Vision and Learning Center (BVLC) and community contributors.

Check out the project site for all the details like

and step-by-step examples.

Join the chat at https://gitter.im/BVLC/caffe

Please join the caffe-users group or gitter chat to ask questions and talk about methods and models. Framework development discussions and thorough bug reports are collected on Issues.

Happy brewing!

License and Citation

Caffe is released under the BSD 2-Clause license. The BVLC reference models are released for unrestricted use.

Please cite Caffe in your publications if it helps your research:

@article{jia2014caffe,
  Author = {Jia, Yangqing and Shelhamer, Evan and Donahue, Jeff and Karayev, Sergey and Long, Jonathan and Girshick, Ross and Guadarrama, Sergio and Darrell, Trevor},
  Journal = {arXiv preprint arXiv:1408.5093},
  Title = {Caffe: Convolutional Architecture for Fast Feature Embedding},
  Year = {2014}
}