Pinned Repositories
pytraj
Python interface of cpptraj
alchemical-analysis
amber2016_meeting
My slides for AMBER 2016 meeting
amber_library
ase
Atomic Simulation Environment - mirrored from https://gitlab.com/ase/ase
molstarview
Try to bring molstar to Jupyter notebook (no lab yet).
notebook-pytraj
pymsmt
Python Metal Site Modeling Toolbox
nglview
Jupyter widget to interactively view molecular structures and trajectories
hainm's Repositories
hainm/plumed2
Development version of plumed 2
hainm/elyxer
eLyXer (pronounced elixir) is a LyX to HTML converter. While there are a ton of such projects all over the web, eLyXer has a clear focus on flexibility and elegant output.
hainm/gh-util
Github command line utilities
hainm/ImplicitSolvent
My python stuff
hainm/MolecularDynamics.jl
Julia utilities for reading in and analyzing Gromacs simulation results
hainm/open-forcefield-group
For discussing and aggregating data for force field development
hainm/test_fortran_wrapping
test wrapping fortran code by ctypes and cython
hainm/UGM_2013