halelab

adapt_PurgeHaplotigs_for_FALCONPhase

Convert output of purge haplotigs to format compatible with FALCON-Phase

apparent

A simple and flexible R package for accurate SNP-based parentage analysis in the absence of guiding information

GBS-Pacecar

Simulates a set of single-end (SE) Illumina GBS reads with specifiable variant frequencies

GBS-SNP-CROP

GBS SNP Calling Reference Optional Pipeline

GMPR

Calculate the normalizing factors for zeroinflated sequencing data such as microbiome sequencing data

Miscellaneous-Scripts

NIR-kiwiberry

Supplemental data and model files (Mumford et al. 2023)

qiime2R

Import qiime2 artifacts to R

halelab/GBS-SNP-CROP

GBS SNP Calling Reference Optional Pipeline

halelab/apparent

A simple and flexible R package for accurate SNP-based parentage analysis in the absence of guiding information

halelab/adapt_PurgeHaplotigs_for_FALCONPhase

Convert output of purge haplotigs to format compatible with FALCON-Phase

halelab/GBS-Pacecar

Simulates a set of single-end (SE) Illumina GBS reads with specifiable variant frequencies

halelab/GMPR

Calculate the normalizing factors for zeroinflated sequencing data such as microbiome sequencing data

halelab/Miscellaneous-Scripts

halelab/NIR-kiwiberry

Supplemental data and model files (Mumford et al. 2023)

halelab/qiime2R

Import qiime2 artifacts to R