nanopore-tools

squiggle matching tools Roadmap

This roadmap outlines our plan to focus on creating Docker containers for a variety of tools dedicated to signal matching, commonly known as squiggle matching. These tools are essential for analyzing raw signal data in genomics and other fields. Below are the tools we plan to work on, with links to their respective repositories or relevant resources, where applicable.

Mapping

Rawalign

Rawalign

UNCALLED (different from UNCALLED4)

UNCALLED

UNCALLED 4

UNCALLED 4

Sigmap

SigMap

RawHash

RawHash

Classification

Sigmoni

Sigmoni.

BaseLess

BaseLess

SquiggleNet

SquiggleNet