/Chimerax-clix

An intelligent command line interface for ChimeraX

Primary LanguagePythonMIT LicenseMIT

CliX

An intelligent command line interface for ChimeraX.

Features

  • Command suggestion
  • Command/keyword completion
  • Syntax highlighting
  • Multi-line execution

Installation

From toolshed

clix is available as a toolshed bundle. Go to Tools > More Tools, find clix and click Install.

From source

  1. Get the source code.

    • Get the latest release and unzip it.
    • or clone this repository.
      git clone git+https://github.com/hanjinliu/ChimeraX-clix
    • or manually download the contents from the "<> Code" pulldown menu in this page.
  2. Install clix using ChimeraX built-in command line interface

    devel install "path/to/ChimeraX-clix"

Start CliX

CliX widget is under Tools > General > CliX.

If you want to replace the built-in command line interface with clix, open Favorites > Settings... and define a startup as follows:

ui tool hide "command line interface"
ui tool show clix

Issues/Requests

If you find a bug, or have some feature requests, feel free to open an issue in this GitHub repository, or contact me via X/Twitter.