hanzlika
CZ-OPENSCREEN at IMG CAS * Master's student of Bioinformatics and Chemoinformatics at UCT Prague
CZ-OPENSCREENPrague
Pinned Repositories
Applications-for-Optical-Chemical-Structure-Recognition
Repository for my the dataset creation, OCSR tool testing and evaluation steps of my bachelor's thesis.
DECIMER-Image-Segmentation
Using decimer-segmentation to extract structures out of DrugHunter.
drughunter-molecule-extractor
A miniproject focused on creating a script for repeated extraction of molecules and attached text information from pdf files published on https://drughunter.com/, primarily on the sets published on https://drughunter.com/molecules-of-the-month/ and https://drughunter.com/resource_category/approved-drug-reviews/ using OCSR.
LiabilityPredictor
Using QSAR modeling to predict if a compound will be a liability to a given assay
MolScribe
Updated setup.py requirments so that package can be installed
OCSR-Segmentation-Bench
Benchmarking of freely available tools for segmentation of chemical structure images from publication papers.
PubChem-Bioassays-Promiscuity
Analysis of compounds promiscuity in PubChem Bioassays data
SuffixArrayInducedSorting
viterbi_learning
MolScribe
Robust Molecular Structure Recognition with Image-to-Graph Generation
hanzlika's Repositories
hanzlika/drughunter-molecule-extractor
A miniproject focused on creating a script for repeated extraction of molecules and attached text information from pdf files published on https://drughunter.com/, primarily on the sets published on https://drughunter.com/molecules-of-the-month/ and https://drughunter.com/resource_category/approved-drug-reviews/ using OCSR.
hanzlika/Applications-for-Optical-Chemical-Structure-Recognition
Repository for my the dataset creation, OCSR tool testing and evaluation steps of my bachelor's thesis.
hanzlika/DECIMER-Image-Segmentation
Using decimer-segmentation to extract structures out of DrugHunter.
hanzlika/LiabilityPredictor
Using QSAR modeling to predict if a compound will be a liability to a given assay
hanzlika/MolScribe
Updated setup.py requirments so that package can be installed
hanzlika/OCSR-Segmentation-Bench
Benchmarking of freely available tools for segmentation of chemical structure images from publication papers.
hanzlika/PubChem-Bioassays-Promiscuity
Analysis of compounds promiscuity in PubChem Bioassays data
hanzlika/SuffixArrayInducedSorting
hanzlika/viterbi_learning