Pinned Repositories
SNAF
Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing data, it further leverages both deep learning and hierarchical Bayesian models to prioritize certain candidates for experimental validation
APPM
Neoantigen Presentation Prediction Model, named APPM, is a neoantigen predictor build by HLA-peptides mass spectrometry data and convolutional neural network (CNN). Compared to the netMHCpan4.0, our framework demonstrates higher values of area under the ROC curve (AUC) in some HLA alleles.
gamma_delta_TCR
TRB_analiysis
ALRA
Imputation method for scRNA-seq based on low-rank approximation
scProgram
TFvelo
haoqing12's Repositories
haoqing12/gamma_delta_TCR
haoqing12/TRB_analiysis
haoqing12/APPM
Neoantigen Presentation Prediction Model, named APPM, is a neoantigen predictor build by HLA-peptides mass spectrometry data and convolutional neural network (CNN). Compared to the netMHCpan4.0, our framework demonstrates higher values of area under the ROC curve (AUC) in some HLA alleles.