hartwigmedical/scripts

Issue with generating mappability

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Hi,
I guess I have an issue similar to #47 . After executing the script, I do not obtain the result I was expecting. Concretely, the last column (the mappability one) does not appear in the output of gccount. However, I do not see any error messages and gccount does output a log message saying the mappability has been included.
Could you indicate which versions of gem and gccount you are using? Could you even indicate from where you obtained said versions?
Thank you