hatbry

Pinned Repositories

anonymize-slide
Delete the label from a whole-slide image
Language:Python00
CLAM
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering
Language:Python00
openslide-python
Python bindings to OpenSlide
Language:Python00
py-wsi
Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch sampling and storing using OpenSlide. Patches may be stored in LMDB, HDF5 files, or to disk. It is highly recommended to fork and download this repository so that personal customisations can be made for your work.
Language:Jupyter Notebook00
svs_label
Removes label and macro images from SVS whole-slide image files and replaces label with custom QR code and text
Language:Python00

hatbry's Repositories

hatbry/anonymize-slide
Delete the label from a whole-slide image
Language:Python00
hatbry/CLAM
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering
Language:Python00
hatbry/openslide-python
Python bindings to OpenSlide
Language:Python00
hatbry/py-wsi
Python package for dealing with whole slide images (.svs) for machine learning, particularly for fast prototyping. Includes patch sampling and storing using OpenSlide. Patches may be stored in LMDB, HDF5 files, or to disk. It is highly recommended to fork and download this repository so that personal customisations can be made for your work.
Language:Jupyter Notebook00
hatbry/svs_label
Removes label and macro images from SVS whole-slide image files and replaces label with custom QR code and text
Language:Python00