havablair
Soil scientist. Excited about soil, open science, and evidence synthesis.
University of WisconsinMadison, WI
Pinned Repositories
aqp-examples
A collection of soil profile visualizations made with the aqp package in R.
bookdown
Authoring Books and Technical Documents with R Markdown
bookdown-demo
bookdown demo, attempt to publish to github pages
demo-quarto-book
A demo book to illustrate most basic process and files for publishing a quarto book to github pages
mbde-calc
Soil microbial biomass carbon and nitrogen calculations (chloroform direct extraction method)
mn-soils-notes
Rough draft of notes from 2019 field course "Minnesota Soils & Land Use"
poxc
Processing POXC data (soil analysis) and performing calculations
rmd-report
Materials from "Sharing Soil Health Data with Reproducible Reports in R" 06 May 2020
sh-cluster
Code supporting Blair et al. (2024) manuscript "A data-driven topsoil classification to support soil health assessment in Minnesota, USA"
umn-thesis
Reproducible thesis or dissertation setup using Quarto, RStudio, sprinkle of LaTeX, formatted to meet University of Minnesota guidelines. Workshop presented Oct. 24, 2022
havablair's Repositories
havablair/umn-thesis
Reproducible thesis or dissertation setup using Quarto, RStudio, sprinkle of LaTeX, formatted to meet University of Minnesota guidelines. Workshop presented Oct. 24, 2022
havablair/mbde-calc
Soil microbial biomass carbon and nitrogen calculations (chloroform direct extraction method)
havablair/mn-soils-notes
Rough draft of notes from 2019 field course "Minnesota Soils & Land Use"
havablair/poxc
Processing POXC data (soil analysis) and performing calculations
havablair/sh-cluster
Code supporting Blair et al. (2024) manuscript "A data-driven topsoil classification to support soil health assessment in Minnesota, USA"
havablair/aqp-examples
A collection of soil profile visualizations made with the aqp package in R.
havablair/bookdown
Authoring Books and Technical Documents with R Markdown
havablair/bookdown-demo
bookdown demo, attempt to publish to github pages
havablair/demo-quarto-book
A demo book to illustrate most basic process and files for publishing a quarto book to github pages
havablair/eea_hydrolytic
calculations for hydrolytic extracellular enzyme assays performed on soil samples
havablair/FTICR_Processing
R script processing FT-ICR data to organic carbon types
havablair/havablair.github.io
havablair/rmd-report
Materials from "Sharing Soil Health Data with Reproducible Reports in R" 06 May 2020
havablair/plater-prep
Extracellular enzyme assays: R code and explanation for preparing plate reader data for analysis with plater package
havablair/pretest_enzyme_calcs
Calculations for extracellular enzyme pre-test
havablair/r-data-cleaning
A collection of strategies and examples for cleaning & documenting data with R
havablair/r-novice-gapminder
R for Reproducible Scientific Analysis
havablair/r-packages
Example of setting up R package for experimental data and reproducible workflow; cloned from https://github.com/kleinschmidt/r-packages.git
havablair/rstudio-conf
Materials for rstudio::conf
havablair/ses2022
Statistical analysis and plots for Blair et al. poster at Soil Ecology Society Conference 2022
havablair/soil_data_model_survey
Survey of data models used in soil meta analysis
havablair/umn-thesis-latex