Pinned Repositories
BGNN-trait-segmentation
bgnn.org
the bgnn website
drexel_metadata
inhs
inhs related stuff
iqm
source code for "Biodiversity Image Quality Metadata Augments Convolutional Neural Network Classification of Fish Species
Minnow_Segmented_Traits
Using trait segmentation to understand minnow trait evolution across an ecological gradient
ml_fish_seg
r script that uses ml to segment fish/ label/ ruler in a single image into 3 separate images
Morphology-analysis
Extract morphological characteristics from trait segmented fish
myhelpers
SlicerDockers
docker config files for slicer
hdr-bgnn's Repositories
hdr-bgnn/BGNN-trait-segmentation
hdr-bgnn/Minnow_Segmented_Traits
Using trait segmentation to understand minnow trait evolution across an ecological gradient
hdr-bgnn/Morphology-analysis
Extract morphological characteristics from trait segmented fish
hdr-bgnn/bgnn.org
the bgnn website
hdr-bgnn/drexel_metadata
hdr-bgnn/inhs
inhs related stuff
hdr-bgnn/iqm
source code for "Biodiversity Image Quality Metadata Augments Convolutional Neural Network Classification of Fish Species
hdr-bgnn/ml_fish_seg
r script that uses ml to segment fish/ label/ ruler in a single image into 3 separate images
hdr-bgnn/myhelpers
hdr-bgnn/SlicerDockers
docker config files for slicer
hdr-bgnn/BGNN_Core_Workflow
First complet version of the workflow with snakemake
hdr-bgnn/bgnn_related
hdr-bgnn/Crop_image
Small repository to store the cropping step of the BGNN Fish project
hdr-bgnn/drexel_metadata_formatter
Reformats the metadata output file from drexel_metadata repo
hdr-bgnn/fishsnake
hdr-bgnn/Start_with_OSC
This repo intends to collect the information to start with Ohio Supercomputing Centre
hdr-bgnn/traits_tool
Tool to extract traits from segmented images