hemilioxk's Stars
magnusdv/forrel
Forensic pedigree analysis and relatedness inference
smartrank/lrmixstudio
LRmix Studio is a free of charge, open-source (GPLv 3 license), expert system dedicated to the interpretation of forensic DNA profiles, with a particular focus on complex DNA mixtures. LRmix Studio enables measuring the probative value of any (autosomal STR-based) forensic DNA profile. LRmix Studio is programmed after the likelihood ratio model described in Haned et al (FSIG 2012) and Gill & Haned (FSIG 2013). This model explicitly accommodates for uncertainty in the DNA profiles from the allelic drop-out and drop-in phenomena. The program estimates these quantities from the available data, and uses those estimates to generate likelihood ratios. LRmix Studio was designed and developed by Hinda Haned and Jeroen de Jong, and was partly supported by a grant from the Netherlands Genomics Initiative/ Netherlands Organization for Scientific Research (NWO) within the framework of the Forensic Genomics Consortium Netherlands.
gdorum/relMix
Relationship Inference for DNA Mixtures
CSSEGISandData/COVID-19
Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
dosorio/Peptides
An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.
biostars/biostar-handbook
Issue tracker for the Biostar Handbook
samtools/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
lh3/bwa
Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)
genomewalker/microbeco2015
biocore/qiime
Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.
EnvGen/metagenomics-workshop
Metagenomics Workshop
LangilleLab/microbiome_helper
A repository of bioinformatic scripts, SOPs, and tutorials for analyzing microbiome data.
najoshi/sickle
Windowed Adaptive Trimming for fastq files using quality
ablab/spades
SPAdes Genome Assembler