herandolph

IAV_population-variation

Pipelines used for the main analyses in "Genetic ancestry effects on the response to viral infection are pervasive but cell type specific" (Randolph et al. 2021, Science)

COVID-19_gene-environment

Scripts used for the main analyses in "Widespread gene-environment interactions shape the immune response to SARS-CoV-2 infection in hospitalized COVID-19 patients" (Randolph et al. 2025)

COVID-19_PHATE

Scripts to reproduce the transcriptomic analyses in "Sustained IFN signaling is associated with delayed development of SARS-CoV-2-specific immunity" (Brunet-Ratnasingham E*, Morin S*, Randolph HE*, et al. 2024, Nature Communications)

CypD_flu

Scripts used for the computational analyses in "Mitochondrial cyclophilin D promotes disease tolerance by licensing NK cell development and IL-22 production against influenza virus" (Downey et al. 2022, Cell Reports)

herandolph/IAV_population-variation

pipelines used for the main analyses in "Genetic ancestry effects on the response to viral infection are pervasive but cell type specific" (Randolph et al. 2021, Science)

herandolph/COVID-19_gene-environment

herandolph/COVID-19_PHATE

Scripts to reproduce the transcriptomic analyses published in "Sustained IFN signaling is associated with delayed development of SARS-CoV-2-specific immunity" (Brunet-Ratnasingham E*, Morin S*, Randolph HE*, et al. 2024, Nature Communications)

herandolph/CypD_flu

scripts used for the computational analyses in "Mitochondrial cyclophilin D promotes disease tolerance by licensing NK cell development and IL-22 production against influenza virus" (Downey et al. 2022, Cell Reports)