Pinned Repositories
Colab_test
test
diapipeline
Targeted analysis of DIA mass spectrometry data
DiffTestR
Differential Expression Testing on precursor level
igseq_workflow
Workflow to analyze targeted immunoglobulin sequencing data for patient-specific immunoproteogenomics
mqqc
Convenience script for maxquant-based lcms quality control & interactive graphing
mscode
processObisDDAresults
Filter, summarize and visualize TPP/iProphet-based DDA-MS peptide identification results
rscripts
Rscripts to postprocess lcms-related datasets
SECexplorer_HEK293
R/shiny app to explore HEK293 SEC-SWATH-MS dataset
SECexplorer_hela
R Shiny app for exploring SEC-SWATH datasets
heuselm's Repositories
heuselm/Colab_test
test
heuselm/diapipeline
Targeted analysis of DIA mass spectrometry data
heuselm/DiffTestR
Differential Expression Testing on precursor level
heuselm/igseq_workflow
Workflow to analyze targeted immunoglobulin sequencing data for patient-specific immunoproteogenomics
heuselm/mqqc
Convenience script for maxquant-based lcms quality control & interactive graphing
heuselm/mscode
heuselm/processObisDDAresults
Filter, summarize and visualize TPP/iProphet-based DDA-MS peptide identification results
heuselm/rscripts
Rscripts to postprocess lcms-related datasets
heuselm/SECexplorer_HEK293
R/shiny app to explore HEK293 SEC-SWATH-MS dataset
heuselm/SECexplorer_hela
R Shiny app for exploring SEC-SWATH datasets
heuselm/SECexplorer_hela_cc
R Shiny app for exploring SEC-SWATH datasets (complex-centric)
heuselm/SECexplorer_MCF7x3
Viewer app for SEC-MS dataset
heuselm/SECexplorer_THP1
R/Shiny app for exploring SEC-SWATH-MS datasets, THP1 project
heuselm/SECSWATH_PeptideCentricAnalysis
Peptide-centric analysis of SEC fractions profiled by SWATH-MS using the OpenSwath, pyProphet and TRIC workflow
heuselm/swathTUNER
A tool to optimize precursor selection windows in DIA proteomics (Zhang et al. 2015, DOI: 10.1021/acs.jproteome.5b00543)
heuselm/workflows
OpenSWATH Snakemake Workflows