/time_series_prediction

Code for prediction given sequential data with some missing / irregularly-spaced values (PI: Mike Hughes).

Primary LanguageJupyter NotebookMIT LicenseMIT

Time Series Prediction

Code for prediction given sequential data with some missing / irregularly-spaced values (PI: Mike Hughes).

Usual Workflow

$ cd scripts/{dataset}
$ snakemake prep_standardized_data
$ snakemake prep_collapsed_standardized_data
$ snakemake train_lr
$ snakemake train_rnn
$ snakemake train_hmm

Organization

  • docs/ : documentation

  • datasets/ : Dataset files only

    In standardized Tidy CSV format

    Usually, files are TOO LARGE to be in version control.

  • scripts/ : Code to prepare datasets and to train+evaluate models

    Organized by dataset.

  • src/ : Python source code for core methods