Code for prediction given sequential data with some missing / irregularly-spaced values (PI: Mike Hughes).
$ cd scripts/{dataset}
$ snakemake prep_standardized_data
$ snakemake prep_collapsed_standardized_data
$ snakemake train_lr
$ snakemake train_rnn
$ snakemake train_hmm
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docs/ : documentation
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datasets/ : Dataset files only
In standardized Tidy CSV format
Usually, files are TOO LARGE to be in version control.
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scripts/ : Code to prepare datasets and to train+evaluate models
Organized by dataset.
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src/ : Python source code for core methods