Pinned Repositories
Bayesian-Linear-Regression-Experiments
Bayesian Linear Regression with MCMC in IPython Notebook
biocolabs
a collection of colabs useful for molecular biology
biomodals
bioinformatics tools running on modal
dockatron
equibind wrapper
Doing_bayesian_data_analysis
Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke
MD_protein_ligand
Simple protein-ligand complex simulation with OpenMM
nextflow_scripts
nextflow helper scripts
nw_align
Needleman-Wunsch basic implementation
pdb2png
Create a PNG from a PDB file
smiles_to_properties
input SMILES, output molecular properties
hgbrian's Repositories
hgbrian/biocolabs
a collection of colabs useful for molecular biology
hgbrian/biomodals
bioinformatics tools running on modal
hgbrian/Bayesian-Linear-Regression-Experiments
Bayesian Linear Regression with MCMC in IPython Notebook
hgbrian/dockatron
equibind wrapper
hgbrian/Doing_bayesian_data_analysis
Python/PyMC3 versions of the programs described in Doing bayesian data analysis by John K. Kruschke
hgbrian/MD_protein_ligand
Simple protein-ligand complex simulation with OpenMM
hgbrian/nextflow_scripts
nextflow helper scripts
hgbrian/nw_align
Needleman-Wunsch basic implementation
hgbrian/pdb2png
Create a PNG from a PDB file
hgbrian/smiles_to_properties
input SMILES, output molecular properties
hgbrian/d3recipes
d3 recipe-making app built on appengine
hgbrian/dylos_logger
Log readings from a dylos particle counter to GCP (using a raspberry pi)
hgbrian/geneticengineering
Tools and documents for genetic engineering
hgbrian/iolt
internet of lab things
hgbrian/blender_stuff
hgbrian/convnetjs
Deep Learning in Javascript. Train Convolutional Neural Networks (or ordinary ones) in your browser.
hgbrian/deepbind
I have put my modified version of the deepbind code here.
hgbrian/DiffDock
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
hgbrian/flask_heroku
An easy-to-use Flask template for Heroku.
hgbrian/ipynb_experiments
ipynb experiments
hgbrian/limmy_blender_video
hgbrian/nanoGPTMS2
The simplest, fastest repository for training/finetuning medium-sized GPTs.
hgbrian/pydna
Classes and code for representing double stranded DNA and functions for simulating homologous recombination and Gibson assembly.
hgbrian/pymc
PyMC version 3 (PyMC 2 is in branch 2.3)
hgbrian/webllm
Bringing large-language models and chat to web browsers. Everything runs inside the browser with no server support.
hgbrian/zip.js
JavaScript library to zip and unzip files