hiclib/pastis

is this tool still available?

Opened this issue · 2 comments

Dear developer?
I installed this tool according to your instruction, but when I input pastis-mds command, there is nothing, Is this tool still available?
Best,
PF

Hello,
Yes this tool is still available. Can you describe how you've installed it? It seems to be a problem with installation.
Thanks,
N

Hi,
Thanks for your reply! I think there has some problems with the installation.
I installed this tool according to this page(https://projets.cbio.mines-paristech.fr/~nvaroquaux/pastis/install.html).
generally, I created a conda environment for this tool, command like this: conda create -n pastis numpy scipy scikit-learn pandas autograd, and then i activate this conda env, i installed iced and pastis by pip, when i input all those commands pastis, pastis-mds, pastis-nmds, pastis-pm1, or pastis-pm2, there is no reaction.
Best,
PF