Pinned Repositories
bioinfokit
Bioinformatics data analysis and visualization toolkit
catch
A package for designing compact and comprehensive capture probe sets.
dentist
Close assembly gaps using long-reads at high accuracy.
dgenies
Dotplot large Genomes in an Interactive, Efficient and Simple way
flo
Same species annotation lift over pipeline.
Gff3ToBed
HiCPeaks
Identify loops from Hi-C data
juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
mummer-idotplot
Generate interactive dotplot from mummer4 output using plotly
PengfeiInTuebingen's Repositories
PengfeiInTuebingen/bioinfokit
Bioinformatics data analysis and visualization toolkit
PengfeiInTuebingen/catch
A package for designing compact and comprehensive capture probe sets.
PengfeiInTuebingen/dentist
Close assembly gaps using long-reads at high accuracy.
PengfeiInTuebingen/dgenies
Dotplot large Genomes in an Interactive, Efficient and Simple way
PengfeiInTuebingen/flo
Same species annotation lift over pipeline.
PengfeiInTuebingen/Gff3ToBed
PengfeiInTuebingen/HiCPeaks
Identify loops from Hi-C data
PengfeiInTuebingen/juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
PengfeiInTuebingen/mummer-idotplot
Generate interactive dotplot from mummer4 output using plotly
PengfeiInTuebingen/nanoporeReads_dataTransfer
A pipeline to transfer the Nanopore reads to end users
PengfeiInTuebingen/Pengfei.github.io
BY Blog ->
PengfeiInTuebingen/rice_annotation
PengfeiInTuebingen/Sequence
nuc / aa seq
PengfeiInTuebingen/simple_bioscripts
PengfeiInTuebingen/tiny_python_projects
Code for Tiny Python Projects (Manning, 2020, ISBN 1617297518). Learning Python through test-driven development of games and puzzles.
PengfeiInTuebingen/viral-ngs
Viral genomics analysis pipelines
PengfeiInTuebingen/wgdi
WGDI: A user-friendly toolkit for evolutionary analyses of whole-genome duplications and ancestral karyotypes