-
Sequence.pm
-
gcContent.pl Calculate the GC content of a given .fa file
-
fragileCodonAminoUsage.pl Calculate the percentage of fragile codons / amino acids
-
getFaFromBed.pl Get sequence.fa given .bed
-
getFaSeqUp2Subseq.pl Retrive the part of the whole sequence, from start to the given subseq
-
getRevComFa.pl Get the reverse compliment seq
-
getSeqFromGPE.pl Retrive seq given structure.gp(e)
-
getSeqLengthFromGPE.pl Get seq length given structure.gp(e)
-
pickFaGivenName.pl Retrive seq.fa given name from multiseq.fa
-
translateNuc.pl Tranlate nucleotide.fa to aa