Errored out with exit
Opened this issue · 2 comments
Hi! We're trying our best to work with Pastis to generate some beautiful chromosome renderings, but in installation we are being "errored" out, more specifically:
Warning: Assuming default configuration (pastis/utils/{setup_utils,setup}.py was not found)Warning: Assuming default configuration (pastis/optimization/{setup_optimization,setup}.py was not found)Warning: Assuming default configuration (pastis/externals/iced/utils/{setup_utils,setup}.py was not found)Warning: Assuming default configuration (pastis/externals/iced/normalization/{setup_normalization,setup}.py was not found)Warning: Assuming default configuration (pastis/datasets/{setup_datasets,setup}.py was not found)error: Command "gcc -pthread -B /home/blair/anaconda3/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I../src/cblas -I/home/blair/anaconda3/lib/python3.7/site-packages/numpy/core/include -I/home/blair/anaconda3/lib/python3.7/site-packages/numpy/core/include -I/home/blair/anaconda3/include/python3.7m -c pastis/externals/iced/io/fastio_.c -o build/temp.linux-x86_64-3.7/pastis/externals/iced/io/fastio_.o -MMD -MF build/temp.linux-x86_64-3.7/pastis/externals/iced/io/fastio_.o.d" failed with exit status 127
Hi,
as discussed by email, pastis doesn't do any visualization.
In terms of installing pastis, can you let me know how you tried to install it? (pip or python setup.py install) as well as the version of numpy you are using?
Thanks,
N