higlass

Multiscale big data visualization

Pinned Repositories

clodius
Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
Language:Python39 14 5721
higlass
Fast, flexible and extensible genome browser.
Language:JavaScript319 20 57852
higlass-arcs
HiGlass track for displaying arcs between disconnected regions
Language:JavaScript9 2 20
higlass-docker
Builds a docker container wrapping higlass-server and higlass-client in nginx
Language:Shell32 5 10814
higlass-manage
A utility script to manage local docker instances of HiGlass
Language:Python24 4 739
higlass-pileup
Language:JavaScript10 4 03
higlass-python
Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer
Language:Python55 6 5912
higlass-server
Server component for HiGlass that manages and serves tiled data
Language:Python19 17 6221
scipy19
Slides and demos from our SciPyConf 2019 talk
Language:Jupyter Notebook13 3 33
simple-httpfs
Language:Python37 3 814

higlass's Repositories

higlass/higlass
Fast, flexible and extensible genome browser.
Language:JavaScript319 20 57852
higlass/higlass-python
Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer
Language:Python55 6 5912
higlass/clodius
Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
Language:Python39 14 5721
higlass/simple-httpfs
Language:Python37 3 814
higlass/higlass-docker
Builds a docker container wrapping higlass-server and higlass-client in nginx
Language:Shell32 5 10814
higlass/higlass-manage
A utility script to manage local docker instances of HiGlass
Language:Python24 4 739
higlass/higlass-server
Server component for HiGlass that manages and serves tiled data
Language:Python19 17 6221
higlass/scipy19
Slides and demos from our SciPyConf 2019 talk
Language:Jupyter Notebook13 3 33
higlass/higlass-pileup
Language:JavaScript10 4 03
higlass/higlass-arcs
HiGlass track for displaying arcs between disconnected regions
Language:JavaScript9 2 20
higlass/higlass-app
A fully featured application around HiGlass for viewing, exploring, and annotating 1D and 2D genomic data
Language:JavaScript7 8 114
higlass/higlass-multivec
Multivec Tracks for Higlass
Language:HTML7 8 226
higlass/gene_annotations
Language:Python6 4 51
higlass/higlass-sequence
Nucleotide sequence track for HiGlass
Language:JavaScript6 2 23
higlass/higlass-transcripts
Gene transcripts track for HiGlass
Language:JavaScript6 1 62
higlass/higlass-orthologs
Language:JavaScript4 2 0
higlass/higlass-bigwig-datafetcher
Language:JavaScript3 4 02
higlass/higlass-vcf
Language:JavaScript3 2 0
higlass/higlass-zarr-datafetchers
Plugin data fetchers for HiGlass, supporting visualization of Zarr-based files located in object storage systems
Language:JavaScript3 2 02
higlass/higlass-clinvar
Display ClinVar data in HiGlass
Language:JavaScript2 2 0
higlass/higlass-gnomad
Display gnomAD data in HiGlass
Language:JavaScript2 2 10
higlass/range-track
A plugin track for displaying ranges in HiGlass
Language:JavaScript2 2 0
higlass/higlass-barbell
Language:JavaScript1 2 0
higlass/higlass-labelled-points-track
Language:JavaScript1 2 0
higlass/higlass-plugins
Language:HTML1 2 0
higlass/higlass-register
Helper tool to register pluggable tracks
Language:JavaScript1 2 01
higlass/higlass-schema
Pydantic models for HiGlass
Language:Python1 1 11
higlass/higlass-text
Display text in HiGlass
Language:JavaScript1 2 02
higlass/higlass-widget
A standalone Jupyter Widget for HiGlass
Language:Jupyter Notebook1 1 0
higlass/higlass-test-mocks
Language:Roff