/bsmTutorial

This repository houses the analysis codes from the Bayesian preclinical tutorial paper led by the DIA/ASA-BIOP Nonclinical Bayesian Working Group members.

Primary LanguageRMIT LicenseMIT

This repository contains code to reproduce the demonstration in the Bayesian shrinkage model tutorial.

Correspondence: erina.paul@merck.com

Folder descriptions

Library

  • End-to-end scripts for running individual models.

Plots

  • Individual plots (credible interval, ACF, trace, and histrogram) as described in the manuscript.

Output

  • Folder to store all RData output generated by scripts in the Library folder.

Data

  • All processed datasets.

Citation

If you find this tutorial helpful for your work, please cite the following:

Paul E, Bhattacharyya A, Baumgartner R, Mallick H (2023+). Bayesian Shrinkage Models with Applications to Preclinical Research. Statistics in Medicine (In Submission).

Issues

We are happy to troubleshoot any issues with the tutorial. Please contact the maintainer via email or open an issue in the GitHub repository.