hisakatha

hisakatha's Repositories

• hisakatha/bedtools2

  A fork of bedtools mainly for branch: https://github.com/hisakatha/bedtools2/tree/makewindows-initial-window

• hisakatha/collect-regional-kinetics

  Collect kinetics info at specified regions from PacBio ipdSummary results

  Language:Rust30

• hisakatha/collect_ipd_per_kmer

  Language:C

• hisakatha/compare-mapq-between-two-sets

  Language:Rust

• hisakatha/coolpuppy

  A versatile tool to perform pile-up analysis on Hi-C data in .cool format.

• hisakatha/exp2superscript

  This script converts exponents in Excel cells into superscripts

  Language:VBA

• hisakatha/extract-bam-unique-alignment

  Language:Rust30

• hisakatha/GitHubTraining

  This is a test repository for GitHub training.

  Language:Scala1

• hisakatha/hicrep

  Python implementation of HiCRep stratum-adjusted correlation coefficient of Hi-C data with Cooler sparse contact matrix support

  Language:Python10

• hisakatha/HiddenMarkovModel

  Hidden Markov Model for training

  Language:C#30

• hisakatha/homebrew-core

  :beers::penguin: Core formulae for the Linuxbrew package manager

  Language:Ruby30

• hisakatha/homebrew-core-hb

  🍻 Default formulae for the missing package manager for macOS

  Language:Ruby30

• hisakatha/ipd_analysis_on_ce11rel606

  Language:R

• hisakatha/ipd_analysis_on_GRCh38

  Language:R

• hisakatha/ipd_analysis_on_mm39

  Language:Shell

• hisakatha/klab

  Kasahara lab. public repository.

  Language:C30

• hisakatha/mirnylib-legacy

  A legacy repository. Useful functionality was ported to cooltools.lib.numutils.

  Language:Python10

• hisakatha/mouse-h3kd-analysis

  Scripts for mouse histone H3 knockdown analysis

  Language:Shell201

• hisakatha/repos_for_ipd_analysis

  Language:Shell

• hisakatha/snhic-dequeker

  Modification to the codes from https://doi.org/10.5281/zenodo.5906351

  Language:Python

• hisakatha/wormbase-annotations

  Language:Shell