Pinned Repositories
clinviro
An open source Laboratory Information Management System for HIV genotypic resistance test for laboratories
codfreq
FASTQ-to-CodFreq pipeline for HIV-1 and SARS-CoV-2
covid-drdb-payload
A relational database of SARS-CoV-2 resistance data.
hivfacts
Structured knowledge base of HIV-1/HIV-2.
icosa
The common library used by the websites created by HIVDB team
nucamino
A nucleotide to amino acid alignment program optimized for virus gene sequences.
post-align
A post alignment toolkit for refining pairwise/multiple alignment sequences.
sierra
HIVDB Genotypic Resistance Interpretation Program
sierra-client
HIVdb webservice client
sierra-sars2
Stanford University HIVDB Team's Repositories
hivdb/sierra
HIVDB Genotypic Resistance Interpretation Program
hivdb/codfreq
FASTQ-to-CodFreq pipeline for HIV-1 and SARS-CoV-2
hivdb/sierra-client
HIVdb webservice client
hivdb/covid-drdb-payload
A relational database of SARS-CoV-2 resistance data.
hivdb/clinviro
An open source Laboratory Information Management System for HIV genotypic resistance test for laboratories
hivdb/hivfacts
Structured knowledge base of HIV-1/HIV-2.
hivdb/icosa
The common library used by the websites created by HIVDB team
hivdb/post-align
A post alignment toolkit for refining pairwise/multiple alignment sequences.
hivdb/sierra-sars2
hivdb/covid-drdb
hivdb/poliopoly
hivdb/chiro-cms
hivdb/genbank_submission_tool
hivdb/sierra-core
Core code of Sierra Project.
hivdb/covid-drdb-reports
hivdb/hivdb-cms
Static CMS data source for hivdb.stanford.edu
hivdb/aapcnt-previewer
hivdb/chat_HIVDB_paper
hivdb/chatpaper
hivdb/chiro-frontend
Coronavirus frontend, CoV-Rx-DB,
hivdb/codfreq-sra-hiv
hivdb/Envelope
gp120, gp41 files and code
hivdb/genbank_seq_download
hivdb/HBV-alignment
HBV analysis
hivdb/hiv-capsid-data
HIV capsid data
hivdb/hivdb-DTG
hivdb/polio-mutations
hivdb/sgsdb
Scripts to generate SGS database
hivdb/sierra-hbv
Stanford University Sierra Program for Hepatitis B
hivdb/study_metadata
Fetch pub med