Pinned Repositories
autowrap
Generates Python Extension modules from Cythons PXD files
CppLowess
A pure C++ implementation of the lowess algorithm using templates
crawdad
Chromatographic Peakpicker -- Fork of the Crawdad code from proteowizard using CMake build system
docker_files
flaming-archer
MetFusion
MetFusion provides an integrative approach to combine data from different sources in order to improve the identification of compounds from metabolomics experiments via MS and NMR data.
msproteomicstools-svn-mirror
OpenMS
The codebase of the OpenMS project
pymzML
pymzML - an interface between Python and mzML Mass spectrometry Files
pywikipedia-git
hroest's Repositories
hroest/pymzML
pymzML - an interface between Python and mzML Mass spectrometry Files
hroest/autowrap
Generates Python Extension modules from Cythons PXD files
hroest/docker_files
hroest/OpenMS
The codebase of the OpenMS project
hroest/AlignmentC
Alignment code in C++
hroest/CellProfiler
An open-source application for biological image analysis
hroest/config-scripts
hroest/containers
Bioinformatics containers
hroest/containers-rules-manuscript
Recommendations to contenarized your bioinformatics software
hroest/contrib
The OpenMS contrib libraries
hroest/COVID-19
Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE
hroest/covid_19
COVID19 case numbers Cantons of Switzerland and Principality of Liechtenstein (FL) - case numbers include persons tested in the respective area. The data is updated at best once a day (times of collection and update may vary). Help closing the gaps:
hroest/DIAlignR
This is a R package for alignment of DIA mass-spec data
hroest/docker-trigger-openms
hroest/dockerfiles
This repository holds Dockerfiles for creating docker images for several OpenMS configurations based on different base images.
hroest/doxygen
Official doxygen git repository
hroest/gedcom-file-processor
A utility to produce lists of individuals, families and children, from a GEDCOM format file. These lists are used by the gedcom-reporter, gedcom-website-builder and gedcom-splitter utilities.
hroest/gedcom-splitter
A utility to split a GEDCOM format file
hroest/IsoSpec
Libraries for fine isotopic structure calculator.
hroest/Labnotebook-Template
hroest/mapwarper
free open source public map georeferencer, georectifier and warper
hroest/ms-numpress
Implementations of two compression schemes for numeric data found from mass spectrometers.
hroest/msproteomicstools
Some hopefully useful tools for mass spectrometry applied to proteomics
hroest/ontario-covid19
Script(s) to scrape Ontario's covid19 data and save in mongodb
hroest/pyprophet
python reimplementation of mProphet
hroest/pyprophet-1
Python reimplementation of mProphet algorithm
hroest/srmcollider
Computes interferences in SRM (Selected Reaction Monitoring) experiments.
hroest/test_repository
To test and learn git
hroest/wikipedia-toolserver
Repository for all my toolserver scripts
hroest/wikireview