Pinned Repositories
bioregistry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
bioversions
🪝 What's the latest version for each database?
CoderGPT
CoderGPT
envo
A community-driven ontology for the representation of environments
llm-change-agent
LLM Change Agent is a command-line interface (CLI) tool designed to interact with various language models for generating and modifying ontology definitions. It offers a range of functionalities to streamline KGCL command generation tasks.
MOO_mappings
Mondo-OMIM-ORDO mappings
oakx-oger
OGER plugin for oaklib.
ontobot-demo
Demo for ontobot-change-agent
pansql
sqldf for pandas
sphintoxetry-cookiecutter
A Cookiecutter template for BBOP work
hrshdhgd's Repositories
hrshdhgd/pansql
sqldf for pandas
hrshdhgd/CoderGPT
CoderGPT
hrshdhgd/llm-change-agent
LLM Change Agent is a command-line interface (CLI) tool designed to interact with various language models for generating and modifying ontology definitions. It offers a range of functionalities to streamline KGCL command generation tasks.
hrshdhgd/sphintoxetry-cookiecutter
A Cookiecutter template for BBOP work
hrshdhgd/envo
A community-driven ontology for the representation of environments
hrshdhgd/oakx-oger
OGER plugin for oaklib.
hrshdhgd/ontobot-demo
Demo for ontobot-change-agent
hrshdhgd/bioregistry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
hrshdhgd/bioversions
🪝 What's the latest version for each database?
hrshdhgd/cell-ontology
An ontology of cell types
hrshdhgd/class-resolver
🔍 Lookup classes and instantiate them with style
hrshdhgd/cookie-tester
Test `sphintoxetry-cookiecutter`
hrshdhgd/curies
🐸 Idiomatic conversion between URIs and compact URIs (CURIEs)
hrshdhgd/go-ontology
Source ontology files for the Gene Ontology
hrshdhgd/hrshdhgd
hrshdhgd/kgcl-schema
hrshdhgd/mondo
Mondo Disease Ontology
hrshdhgd/uberon
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
hrshdhgd/kegg-ingest
hrshdhgd/oakx-spacy
Spacy plugin for OAK
hrshdhgd/obo-relations
RO is an ontology of relations for use with biological ontologies
hrshdhgd/ontodiff-curator
hrshdhgd/openai-examples
hrshdhgd/pato
PATO - the Phenotype And Trait Ontology
hrshdhgd/plant-ontology
Repository for the Plant Ontology
hrshdhgd/pyobo
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
hrshdhgd/s3-pickles
Pickle files deployed into S3 buckets
hrshdhgd/w3id.org
Website source code for w3id.org.
hrshdhgd/workflow-test
hrshdhgd/workflows
Quality control GitHub action project