huangnengCSU

huangnengCSU's Stars

• DecodeGenetics/graphtyper

  Population-scale genotyping using pangenome graphs

  Language:C++17520

• TimD1/nPoRe

  nPoRe: n-Polymer Realigner for improved pileup-based variant calling

  Language:Python18

• PengNi/longmethyl

  Language:Python2

• marbl/HG002

  A complete diploid human genome

  1055

• maiziex/Aquila

  Diploid personal genome assembly and comprehensive variant detection based on linked-reads

  Language:Python218

• mcfrith/tandem-genotypes

  Language:Python477

• Caldis/Mos

  一个用于在 macOS 上平滑你的鼠标滚动效果或单独设置滚动方向的小工具, 让你的滚轮爽如触控板 | A lightweight tool used to smooth scrolling and set scroll direction independently for your mouse on macOS

  Language:Swift15k526

• malonge/RagTag

  Tools for fast and flexible genome assembly scaffolding and improvement

  Language:Python48250

• mikolmogorov/Ragout

  Chromosome-level scaffolding using multiple references

  Language:Python15927

• nf-core/eager

  A fully reproducible and state-of-the-art ancient DNA analysis pipeline

  Language:Nextflow15481

• Eugeny/tabby

  A terminal for a more modern age

  Language:TypeScript60.6k3.4k

• Old-Shatterhand/MSADRL

  (Deep) Reinforcement Learning Framework to align multiple sequences.

  Language:Python2

• KolmogorovLab/Severus

  A tool for somatic structural variant calling using long reads

  Language:Python1065

• esrice/trio_binning

  Programs implementing the trio-binning genome assembly method

  Language:Python195

• lh3/unicall

  A wrapper for calling small variants from human germline high-coverage single-sample Illumina data

  Language:Perl135

• lh3/CHM-eval

  Language:TeX538

• nanoporetech/pod5-file-format

  Pod5: a high performance file format for nanopore reads.

  Language:C++13919

• nanoporetech/dorado

  Oxford Nanopore's Basecaller

  Language:C++56068

• zu1k/translator

  简单、轻量、好用的划词翻译软件

  Language:Rust1.3k107

• jts/nanocorrect

  Experimental pipeline for correcting nanopore reads

  Language:Jupyter Notebook3910

• h2y/Shadowrocket-ADBlock-Rules

  提供多款 Shadowrocket 规则，带广告过滤功能。用于 iOS 未越狱设备选择性地自动翻墙。

  Language:Python15.7k2.3k

• mbhall88/ssubmit

  Submit slurm sbatch jobs without a script

  Language:Rust655

• nanoporetech/duplex-tools

  Splitting of sequence reads by internal adapter sequence search

  Language:Python527

• kingToolbox/WindTerm

  A professional cross-platform SSH/Sftp/Shell/Telnet/Serial terminal.

  Language:C24.3k1.9k

• vcftools/vcftools

  A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project.

  Language:C++509148

• buaazp/vimconf

  Personal vim conf and plugins for Mac and Linux.

  Language:Vim script7430

• microsoft/language-server-protocol

  Defines a common protocol for language servers.

  Language:HTML11.4k812

• dfguan/purge_dups

  haplotypic duplication identification tool

  Language:C21623

• lh3/srf

  SRF: Satellite Repeat Finder

  Language:TeX896

• lbcb-sci/racon

  Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads

  Language:C++20734