/suns

Find SUNs for a genome based on its WGAC and SUNK coordinates. Analysis is based on Sudmant et al. 2010 (Science).

Primary LanguagePythonMIT LicenseMIT

Run:

. config.sh
make

Test output:

diff -u <(cut -f 4 mismatches.bed) <(cut -f 2 mismatches.fasta.tab | tr '[:lower:]' '[:upper:]')

No output from this command means everything worked.