Pinned Repositories
biscuit
BISulfite-seq CUI Toolkit
biscuit_paper_code
Scripts and Templates For Results in the BISCUIT Paper
Biscuit_Snakemake_Workflow
Snakemake Workflow For Running Biscuit https://github.com/huishenlab/biscuit
biscuitBlaster
Alignment pipeline for biscuit
bisplotti
Plotting package for bisulfite sequencing and methylation arrays
dupsifter
WGBS/WGS PCR Duplicate Marking
multiscale_methylation_plot_pipeline
Snakemake pipeline to generate multiscale methylation plots
STORM_seq_automation
This repository contains the automation scripts for STORM-seq
sv_calling_docker
This repository contains a dockerfile and build script to make a container for SV calling from WG(B)S
utils
some utility C code
Shen Lab at VAI's Repositories
huishenlab/biscuit
BISulfite-seq CUI Toolkit
huishenlab/bisplotti
Plotting package for bisulfite sequencing and methylation arrays
huishenlab/dupsifter
WGBS/WGS PCR Duplicate Marking
huishenlab/Biscuit_Snakemake_Workflow
Snakemake Workflow For Running Biscuit https://github.com/huishenlab/biscuit
huishenlab/TE_quantification_pipeline
huishenlab/multiscale_methylation_plot_pipeline
Snakemake pipeline to generate multiscale methylation plots
huishenlab/sv_calling_docker
This repository contains a dockerfile and build script to make a container for SV calling from WG(B)S
huishenlab/biscuit_paper_code
Scripts and Templates For Results in the BISCUIT Paper
huishenlab/biscuitBlaster
Alignment pipeline for biscuit
huishenlab/bsseq
Devel repository for bsseq
huishenlab/sgsl
A lightweight subset of GNU scientific library
huishenlab/STORM_seq_automation
This repository contains the automation scripts for STORM-seq
huishenlab/utils
some utility C code
huishenlab/TE_quantification_snakemake