hy395

Computational biologist @calico. Ph.D trained in Christina Leslie lab.

South San Francisco, CA

Pinned Repositories

basenji
Sequential regulatory activity predictions with deep convolutional neural networks.
Language:Jupyter Notebook0 1 00
BindSpace
TFBS models trained with HT-SELEX data using StarSpace embedding method
2 2 00
CAPSELEX
adding cofactors to bindspace
Language:R0 2 00
cellxgene
An interactive explorer for single-cell transcriptomics data
Language:JavaScript0 1 00
DropletUtils
Clone of the Bioconductor repository for the DropletUtils package.
Language:R0 1 00
hy395.github.io
Language:CSS00
kbmtl
Kernelized Bayesian Multitask Learning
Language:R0 2 00
NGS_scripts
Language:R1 2 00
R-course
Language:R2 3 00
Starspace
Learning embeddings for classification, retrieval and ranking.
Language:C++0 2 00

hy395's Repositories

hy395/BindSpace
TFBS models trained with HT-SELEX data using StarSpace embedding method
2 2 00
hy395/R-course
Language:R2 3 00
hy395/NGS_scripts
Language:R1 2 00
hy395/basenji
Sequential regulatory activity predictions with deep convolutional neural networks.
Language:Jupyter Notebook0 1 00
hy395/CAPSELEX
adding cofactors to bindspace
Language:R0 2 00
hy395/cellxgene
An interactive explorer for single-cell transcriptomics data
Language:JavaScript0 1 00
hy395/DropletUtils
Clone of the Bioconductor repository for the DropletUtils package.
Language:R0 1 00
hy395/hy395.github.io
Language:CSS00
hy395/kbmtl
Kernelized Bayesian Multitask Learning
Language:R0 2 00
hy395/Starspace
Learning embeddings for classification, retrieval and ranking.
Language:C++0 2 00
hy395/models
Model zoo for genomics
Language:Jupyter Notebook
hy395/scVI
Deep generative modeling for single-cell transcriptomics
Language:Python1 0
hy395/solo
software to detect doublets
Language:Python1 0
hy395/tfmodisco
TF MOtif Discovery from Importance SCOres
Language:Jupyter Notebook1 0