Pinned Repositories
auto-lecture-note
colab-biolab
echidna
On-the-fly stream parallelizer for FASTQ and FASTA processing
ecliptic
A generalized pipeline for CLIP-seq and PAR-CLIP analysis.
moves-daily-life
Plots how you spend your days from Moves data
poreplex
A versatile sequenced read processor for nanopore direct RNA sequencing
sars-cov-2-transcriptome
Supplemental code for "the architecture of SARS-CoV-2 transcriptome" paper
seamlessf5
Helpers for smoother transitioning to multi-read FAST5 files
tailseeker
Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer
hyeshik's Repositories
hyeshik/sars-cov-2-transcriptome
Supplemental code for "the architecture of SARS-CoV-2 transcriptome" paper
hyeshik/poreplex
A versatile sequenced read processor for nanopore direct RNA sequencing
hyeshik/moves-daily-life
Plots how you spend your days from Moves data
hyeshik/auto-lecture-note
hyeshik/tailseeker
Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer
hyeshik/colab-biolab
hyeshik/seamlessf5
Helpers for smoother transitioning to multi-read FAST5 files
hyeshik/rnarry
Simple tools for data analysis for molecular biology of RNA
hyeshik/echidna
On-the-fly stream parallelizer for FASTQ and FASTA processing
hyeshik/bskim-2015-pre-miRNA
Supplementary data for Kim et al. (2015), a TUT4/7 paper from the V. Narry Kim lab.
hyeshik/ecliptic
A generalized pipeline for CLIP-seq and PAR-CLIP analysis.
hyeshik/korail2
Korail (www.letskorail.com) wrapper for Python.
hyeshik/nrclip
Analysis pipeline for CLIP-seq and ribosome profiling data
hyeshik/xrdp
xrdp: an open source RDP server
hyeshik/snubioinfo-test-git
hyeshik/algospot
A fork of algospot to run a beginner bioinformatics programming tutor site, "fiveprime".
hyeshik/AYB2
AYB2 -- All Your Base version 2. A base caller for the Illumina platform
hyeshik/langdev.org
LangDev main website and SSO service
hyeshik/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
hyeshik/ont_fast5_api
Oxford Nanopore Technologies fast5 API software
hyeshik/pomegranate
Fast, flexible and easy to use probabilistic modelling in Python.