Pinned Repositories
AcDb
Some tools for working with acorg experiment databases
advent-of-code-2023
adventofcode2021
my solutions to aoc2021
Bayesian-Clustering
repo created for posting code to pymc discourse to ask a question
fastq-read-and-write-for-MATLAB-with-C-Mex-
a fast fastq read and write function for MATLAB mostly coded in C and mexed
Image-Classification
This code written in pytorch uses several convolutional layers to classify images
Neural-Network-Tumor-Prediction
Neural network code for predicting whether a tumor is bening or malignant
PyRacmacs
A complete python interface to Racmacs via rpy2
PyReports
PyReports is a python based html report generator that allows typing up reports easily and quickly. Besides many other features, it also allows embedding plotly figures and adding latex formulas.
Residual-Network-Pytorch
Implementation of residual networks with basic blocks
iAvicenna's Repositories
iAvicenna/Residual-Network-Pytorch
Implementation of residual networks with basic blocks
iAvicenna/AcDb
Some tools for working with acorg experiment databases
iAvicenna/advent-of-code-2023
iAvicenna/adventofcode2021
my solutions to aoc2021
iAvicenna/Bayesian-Clustering
repo created for posting code to pymc discourse to ask a question
iAvicenna/fastq-read-and-write-for-MATLAB-with-C-Mex-
a fast fastq read and write function for MATLAB mostly coded in C and mexed
iAvicenna/Image-Classification
This code written in pytorch uses several convolutional layers to classify images
iAvicenna/Neural-Network-Tumor-Prediction
Neural network code for predicting whether a tumor is bening or malignant
iAvicenna/Nuka
ultra-fast nucleotide sequence to amino acid sequence conversion using hashing
iAvicenna/PyRacmacs
A complete python interface to Racmacs via rpy2
iAvicenna/PyReports
PyReports is a python based html report generator that allows typing up reports easily and quickly. Besides many other features, it also allows embedding plotly figures and adding latex formulas.
iAvicenna/NeutralizationBench
Simulate antibody antigen neutralization ODEs for any number of antibodies and antigens
iAvicenna/omicron-neutralization-paper
antigenic cartography and antibody landscapes related code and figures for the paper Analysis of SARS-CoV-2 Omicron Neutralization Data up to 2022-28-01
iAvicenna/Racmacs
Racmacs R package for performing antigenic cartography https://acorg.github.io/Racmacs
iAvicenna/receptor-binding-sites
Depositing information and structures related to location of receptor binding sites in various HA structures