Pinned Repositories
cytoscape.js-context-menus
A Cytoscape.js extension to provide context menu around elements and core instance
cytoscape.js-expand-collapse
A Cytoscape.js extension to expand/collapse nodes for better management of complexity of compound graphs
cytoscape.js-fcose
fCoSE: a fast Compound Spring Embedder
cytoscape.js-grid-guide
A Cytsocape.js extension to provide a framework for grid interactions such as grid lines and snapping to grid, and guidelines and snap support for alignment of nodes.
cytoscape.js-layout-service
Web-service on cytoscape.js to layout graphs
cytoscape.js-layout-utilities
Miscellaneous utilities for placement of nodes or components complementary to a main layout algorithm
cytoscape.js-undo-redo
A Cytoscape.js extension to provide an undo-redo framework
cytoscape.js-view-utilities
A Cytoscape.js extension to provide miscellenaous view utilities such as hiding and highlighting nodes/edges
newt
A web application to visualize and edit pathway models
pathway-mapper
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
i-Vis at Bilkent's Repositories
iVis-at-Bilkent/cytoscape.js-fcose
fCoSE: a fast Compound Spring Embedder
iVis-at-Bilkent/cytoscape.js-expand-collapse
A Cytoscape.js extension to expand/collapse nodes for better management of complexity of compound graphs
iVis-at-Bilkent/cytoscape.js-context-menus
A Cytoscape.js extension to provide context menu around elements and core instance
iVis-at-Bilkent/cytoscape.js-grid-guide
A Cytsocape.js extension to provide a framework for grid interactions such as grid lines and snapping to grid, and guidelines and snap support for alignment of nodes.
iVis-at-Bilkent/pathway-mapper
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
iVis-at-Bilkent/newt
A web application to visualize and edit pathway models
iVis-at-Bilkent/cytoscape.js-edge-editing
A Cytoscape.js extension enabling interactive editing of edge anchor (bend or control) points
iVis-at-Bilkent/sbgnviz.js
A web based visualization tool for process description maps in SBGN
iVis-at-Bilkent/cytoscape.js-cise
An implementation of the circular layout algorithm by Dogrusoz et al. as a Cytoscape.js extension
iVis-at-Bilkent/cytoscape.js-node-editing
A Cytoscape.js extension to provide grapples to resize nodes
iVis-at-Bilkent/chise.js
A web application to visualize and edit the pathway models represented by SBGN Process Description Notation
iVis-at-Bilkent/cytoscape.js-avsdf
An implementation of the circular layout algorithm by He & Sykora
iVis-at-Bilkent/syblars
SyBLaRS: Systems Biology Layout & Rendering Service
iVis-at-Bilkent/cytoscape.js-autopan-on-drag
A Cytsocape.js extension to automatically pan when nodes are out of canvas bounds
iVis-at-Bilkent/cose-base
Core module for compound spring embedder based layout styles
iVis-at-Bilkent/cytoscape.js-complexity-management
A Cytoscape.js extension to provide a unified complexity management framework for compound graphs
iVis-at-Bilkent/cytoscape.js-clipboard
A Cytoscape.js extension to provide copy-paste utilities
iVis-at-Bilkent/cytoscape.js-graph-algos
iVis-at-Bilkent/layout-base
Basic layout model and some utilities for some Cytoscape.js layout extensions
iVis-at-Bilkent/cytoscape.js-visual-cues
iVis-at-Bilkent/cmgm
CMGM is a unified complexity management framework for compound graphs
iVis-at-Bilkent/cytoscape.js
Graph theory (a.k.a. network) library for analysis and visualisation (compatible with CommonJS/Node.js/Browserify/Webpack, AMD/Require.js, npm, Bower, jspm, Meteor/Atmosphere, jQuery, and plain JS/JavaScript)
iVis-at-Bilkent/cytoscape.js-layvo
iVis-at-Bilkent/sybvals
SyBValS: Systems Biology Validation Service
iVis-at-Bilkent/cytoscape.js-hyse
Hybrid Spring Embedder
iVis-at-Bilkent/cytoscape-sbgn-stylesheet
View biological networks via Cytoscape.js and sbgn-ml
iVis-at-Bilkent/cytoscape.js-cose-bilkent
The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.
iVis-at-Bilkent/cytosnap
A Node.js package that renders images of Cytoscape.js graphs on the server using Puppeteer
iVis-at-Bilkent/software-artifact-analyzer
SAA: A tool to visually analyze varying software artifacts including source code files, pull requests, issues, and commits, as well as their links and their relationships with developers in a software project to improve the software development process
iVis-at-Bilkent/visuall-advanced-query