Pinned Repositories
2023_sol.27.4_forecast_simplified
a4adiags
Toolbox of stock assessment diagnostics for a4a assessments
a4aIOBET2013
Stock Assessment of Indian Ocean BET using a4a, IOTC WPTT 2013 @ EAS
abc_tuna
adnuts
An R package for NUTS sampling using ADMB
ALKr
R package for calculating Age-Length keys
ASAP
FLR version of the ASAP stock assessment model
iagomosqueira.github.com
Iago Mosqueira's blog
ICESSAI
ICES Training Stock Assessment Introduction
RforFisheries
Teaching material for a course on R for Quantitative Fisheries Science
iagomosqueira's Repositories
iagomosqueira/2023_sol.27.4_forecast_simplified
iagomosqueira/a4adiags
Toolbox of stock assessment diagnostics for a4a assessments
iagomosqueira/abc_tuna
iagomosqueira/adnuts
An R package for NUTS sampling using ADMB
iagomosqueira/cheatsheets
Community-sourced cheatsheets
iagomosqueira/cat3advice
An R package to apply the ICES category 3 data-limited harvest control rules (rfb/rb/chr)
iagomosqueira/docTemplates
Simple Project Management and Document Templates in Markdown for Compatibility and Portability
iagomosqueira/her.27.20-24_WKREBUILD2
Analysis of stock rebuiliding plan for Western Baltic spring spawning herring (her.27.20-24)
iagomosqueira/iagomosqueira
Config files for my GitHub profile.
iagomosqueira/icesTAF
Functions to support the ICES Transparent Assessment Framework
iagomosqueira/IOTC_tuna_fads
iagomosqueira/JABBA
Just Another Bayesian Biomass Assessment
iagomosqueira/jjmr
R package for assessment model
iagomosqueira/mse_fleets_WK
Testing and applying MSEs for multi-fleet OMs, JRC MAY 2022
iagomosqueira/mseExamples
Some draft examples on the usage of FLR's mse package.
iagomosqueira/msy
A collection of methods to estimate equilibrium reference points for fish stocks
iagomosqueira/perfecting_SS3
Test runs of Stock Synthesis 3 with 'perfect' information
iagomosqueira/pkg-dev-masterclass
Materials for the Package Development Masterclass workshop held at posit::conf(2023)
iagomosqueira/SAM
Git page for SAM R-package
iagomosqueira/simtest_SP
Simulation-testing Surplus Production models
iagomosqueira/sol.27.4_benchmark_2024
ICES stock assessment benchmark for sol.27.4 (North Sea sole) in 2024
iagomosqueira/spict
Surplus Production model in Continuous Time
iagomosqueira/SPMpriors
Tool to derive objective priors for r, shape and Generation Time
iagomosqueira/ss3diags
Cookbook for Model Diagnostics in Stock Synthesis
iagomosqueira/ss3om_example
An example OM built around a grid of SS3 runs, weighted and resampled.
iagomosqueira/TAF
Functions to support the ICES Transparent Assessment Framework
iagomosqueira/tc_tctaf22
Training Course on Reproducible science, best practices and ICES Transparent Assessment Framework
iagomosqueira/vmstools
Automatically exported from code.google.com/p/vmstools
iagomosqueira/wd_iotc_oms
IOTC WPM WD on Strategies for the conditioning of operating models for IOTC stocks
iagomosqueira/wiki-example-stockassessment