Pinned Repositories
allenCCF
Tools to work with Allen Inst CCF data in matlab
DeepLabCut
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals
DeepPoseKit
a toolkit for pose estimation using deep learning
dspca
Demixed subspace principal component analysis (dsPCA). This is a dimensionality reduction algorithm for high-dimensional data such as neural population activity.
ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
jacs-cm
JACS Configuration Management
jekyll-lab-notebook
📓 A full-featured electronic lab notebook theme (with plugins!) for Jekyll
nCovMemory
2020新冠肺炎记忆：传媒报道与非虚构写作（持续更新）Memory of 2020 nCov: Media reports and Non-fiction Writings (Continuously updating)
NeuroPyxels
NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.
phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
ianyao's Repositories
ianyao/allenCCF
Tools to work with Allen Inst CCF data in matlab
ianyao/DeepLabCut
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals
ianyao/DeepPoseKit
a toolkit for pose estimation using deep learning
ianyao/dspca
Demixed subspace principal component analysis (dsPCA). This is a dimensionality reduction algorithm for high-dimensional data such as neural population activity.
ianyao/ecephys_spike_sorting
Modules for processing extracellular electrophysiology data from Neuropixels probes
ianyao/jacs-cm
JACS Configuration Management
ianyao/jekyll-lab-notebook
📓 A full-featured electronic lab notebook theme (with plugins!) for Jekyll
ianyao/nCovMemory
2020新冠肺炎记忆：传媒报道与非虚构写作（持续更新）Memory of 2020 nCov: Media reports and Non-fiction Writings (Continuously updating)
ianyao/NeuroPyxels
NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.
ianyao/phy
phy: interactive visualization and manual spike sorting of large-scale ephys data
ianyao/Probabilistic-Programming-and-Bayesian-Methods-for-Hackers
aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)
ianyao/psychofit
A module for fitting 2AFC psychometric data
ianyao/pykilosort
WIP: Python port of Kilosort2
ianyao/pyprobml
Python code for "Machine learning: a probabilistic perspective" (2nd edition)
ianyao/pySpinCapture
a python wrapper to the FLIR PySpin API to capture synchronized video
ianyao/reinforcement-learning-an-introduction
Python Implementation of Reinforcement Learning: An Introduction
ianyao/spikes
cortex lab code for electrophysiology
ianyao/stringer-pachitariu-et-al-2018a
Recordings of 10k neurons during spontaneous behaviors
ianyao/widefield
Image processing and tools for widefield imaging
ianyao/Yet-Another-EfficientDet-Pytorch
The pytorch re-implement of the official efficientdet with SOTA performance in real time and pretrained weights.