Genomic_Inference
The code for the paper: "An Inference Attack on Genomic Data Using Kinship, Complex Correlations, and Phenotype Information" published at IEEE/ACM Transactions on Computational Biology and Bioinformatics ( Volume: 15 , Issue: 4 , July-Aug. 1 2018 ) https://ieeexplore.ieee.org/abstract/document/7935519
Main.m provides two example runs of the model one with Markov chain order 3 and the other one with recombinational model. We did not provide the data in this github repository if you need the data please reach out to us.
If you use any of this code and the information in the paper please use the following bibtex to cite:
@article{deznabi2017inference, title={An inference attack on genomic data using kinship, complex correlations, and phenotype information}, author={Deznabi, Iman and Mobayen, Mohammad and Jafari, Nazanin and Tastan, Oznur and Ayday, Erman}, journal={IEEE/ACM transactions on computational biology and bioinformatics}, volume={15}, number={4}, pages={1333--1343}, year={2017}, publisher={IEEE} }