ijhoskins/satmut_utils

Issues

• Accessory R scripts in Prototype folder

  #14 opened 5 months ago by aturnerhi
  5

• Support CL arguments in any order

  #13 opened 8 months ago by ijhoskins
  0

• Implement automated testing

  #12 opened 8 months ago by ijhoskins
  0

• Remove ID, QUAL, FILTER fields in summary.txt or use them

  #11 opened 8 months ago by ijhoskins
  0

• Support phased SNPs/MNPs and InDels in multi branch

  #10 opened 8 months ago by ijhoskins
  0

• Support read names in any format for primer BQ masking

  #9 opened 8 months ago by ijhoskins
  0

• Use arrays and implement heuristic to make consensus deduplication more efficient

  #8 opened 8 months ago by ijhoskins
  0

• Enable option to ignore InDels

  #7 opened 8 months ago by ijhoskins
  0

• Support complex InDels

  #6 opened 8 months ago by ijhoskins
  0

• Use config files for VCF and summary.txt fields

  #5 opened 8 months ago by ijhoskins
  0

• Use numpy arrays for quality stats

  #4 opened 8 months ago by ijhoskins
  0

• Use slots

  #3 opened 8 months ago by ijhoskins
  0

• Document version in satmut_utils.log

  #2 opened 8 months ago by ijhoskins
  0

• Dockerize satmut_utils

  #1 opened 8 months ago by ijhoskins
  0