ilastik

The interactive learning and segmentation toolkit

Pinned Repositories

ilastik
ilastik-shell, applets, and workflows to string them together.
Language:Python344 41 2k130
ilastik-0.5
Interactive Learning and Segmentation Toolkit
Language:Python24 36 1295
ilastik-feature-selection
Select filter features with mutual-information-based methods
Language:Jupyter Notebook11 21 46
ilastik-napari
ilastik plugin for napari
Language:Python12 19 112
ilastik4ij
ImageJ plugins to run ilastik workflows
Language:Java21 19 6117
lazyflow
lazy parallel ondemand zero copy numpy array data flows with caching and dirty propagation
Language:Python77 27 9059
marching_cubes
Standalone marching cubes implementation and Python bindings
Language:C++96 22 1115
multiHypothesesTracking
Language:C++12 13 77
nature_methods_multicut_pipeline
Language:Python19 16 52
volumina
Volume Slicing and Editing
Language:Python32 25 14467

ilastik's Repositories

ilastik/ilastik
ilastik-shell, applets, and workflows to string them together.
Language:Python344 41 2k130
ilastik/marching_cubes
Standalone marching cubes implementation and Python bindings
Language:C++96 22 1115
ilastik/volumina
Volume Slicing and Editing
Language:Python32 25 14467
ilastik/ilastik4ij
ImageJ plugins to run ilastik workflows
Language:Java21 19 6117
ilastik/ilastik-napari
ilastik plugin for napari
Language:Python12 19 112
ilastik/multiHypothesesTracking
Language:C++12 13 77
ilastik/ilastik-feature-selection
Select filter features with mutual-information-based methods
Language:Jupyter Notebook11 21 46
ilastik/tiktorch
Tiktorch
Language:Python11 11 5911
ilastik/ilastik-conda-recipes
Conda recipes for building ilastik dependencies.
Language:Shell9 13 3116
ilastik/webilastik
A revision of classic ilastik to drop legacy stuff and make it portable
Language:Python6 16 282
ilastik/wsdt
watershed on distance transform
Language:Python5 26 01
ilastik/ilastik.github.io
Language:HTML3 24 5715
ilastik/bioimage-io-resources
resources for the BioImage.IO Model Zoo
Language:HTML2 14 145
ilastik/hytra
Python module for multi HYpotheses TRAcking
Language:Python2 12 117
ilastik/cloud_ilastik
APIs for running ilastik inside HPB infra
Language:Python1 14 19
ilastik/dpct
Dynamic Programming Cell Tracking Solver
Language:C++1 27 0
ilastik/fastfilters
fast gaussian and derivative convolutional filters
Language:C++1 12 01
ilastik/hytra-fork
Python module for multi HYpotheses TRAcking
Language:Python1 30 01
ilastik/ndstructs
Utility classes to deal with 5d arrays
Language:Python1 13 42
ilastik/conda-3rdparty
extract license info for conda environments
Language:Python14 0
ilastik/fastfilters2
SIMD-accelerated 2D and 3D image features
Language:C++12 0
ilastik/ilastikrag
ND Region Adjacency Graph with edge feature algorithms
Language:Jupyter Notebook4 22
ilastik/ilastikrag-fork
ND Region Adjacency Graph with edge feature algorithms
Language:Jupyter Notebook12 6
ilastik/ilastiktools
tools for carving
Language:C++3 24
ilastik/ilastiktools-fork
tools for carving
Language:C++10 03
ilastik/netzip
ZIP file reader optimized for network access
Language:Python3 0
ilastik/netzip.js
ZIP file reader optimized for network access
Language:TypeScript
ilastik/neuroglancer
WebGL-based viewer for volumetric data
Language:TypeScript3 01
ilastik/org.ilastik.bdvsource
Language:Java20 0
ilastik/publish-conda-stack
Scripts to update our published conda packages when our recipes have changed.
Language:Python15 103