Getting problem when I type "./download_dbs.sh"

[ThomasYang0615]

Hello,
I have problem at the final step of installing megSAP : ./download_dbs.sh

When I execute '''download_dbs.sh''' :

• I can't Install CancerHotspots.org, the address of row 25 seems broken
  • wget https://www.cancerhotspots.org/files/hotspots_v2.xls
• I can't Install ClinVar, there will be ERROR:
  • Error in get_ref_seq : Failed to open the file /tmp/local_ngs_data//GRCh38.fa
  • [faidx] Could not build fai index /tmp/local_ngs_data//GRCh38.fa.fai

I did try to find out the solution, but I stuck.
Can you give me a hand?

[noob9721]

Hello,
Did you get a solution for this by any chance? I have the same problem.

[marc-sturm]

Which version of megSAP are u using?
2023_11 or the master?

CancerHotspots:
the URL should work when using the master

Clinvar:
please use the latest master, I just comitted a fix, see 3e253cc

Does it work with the master?