Immunitas Therapeutics

Repo landing page for Immunitas Therapeutics

Pinned Repositories

coding_exercise_TCGA_infiltration
coding exercise using TCGA immune infiltration data
42 2 014
coding_exercises
00
monkeybread
Analyzing cellular niches in spatial transcriptomics data
Language:Python23 2 23
monkeybread-case-study
Application of Monkeybread to a human melanoma tumor dataset
Language:Jupyter Notebook10
NSCLS-PIC
Contains the PIC-seq algorithm and all the needed code and metadata files to analyze and generate figures for Cohen M. & Giladi A. et al. Nature Cancer 2022
Language:R00
recover-counts
Recover transcript counts from log-normalized UMI counts data.
Language:Python8 2 11
terra-docker
Language:Jupyter Notebook00

immunitastx/coding_exercise_TCGA_infiltration
coding exercise using TCGA immune infiltration data
42 2 014
immunitastx/monkeybread
Analyzing cellular niches in spatial transcriptomics data
Language:Python23 2 23
immunitastx/recover-counts
Recover transcript counts from log-normalized UMI counts data.
Language:Python8 2 11
immunitastx/monkeybread-case-study
Application of Monkeybread to a human melanoma tumor dataset
Language:Jupyter Notebook10
immunitastx/coding_exercises
00
immunitastx/NSCLS-PIC
Contains the PIC-seq algorithm and all the needed code and metadata files to analyze and generate figures for Cohen M. & Giladi A. et al. Nature Cancer 2022
Language:R00
immunitastx/terra-docker
Language:Jupyter Notebook00