Pinned Repositories
dcsurv
Discrete Calibrated Survival
DeePSC
discern
Deep Single Cell Expression ReconstructioN for improved cell clustering and cell subtype and state detection
ecarenet
epigenetic-neural-glioblastoma
MAXOMOD_Pipeline
Reproducible analysis pipeline for the MAXOMOD project: Multiomic ALS signatures highlight sex differences and molecular subclusters and identify the MAPK pathway as therapeutic target
rna_augment
scaden
Repository of the Scaden tool for cell type deconvolution of RNA-seq data.
scGAN
Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks
TCRs-pMHC
Datasets containing CDR3 Beta sequences and peptide sequences, with a true label indication whether the combination binds or not.
Institute of Medical Systems Biology's Repositories
imsb-uke/scGAN
Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks
imsb-uke/MAXOMOD_Pipeline
Reproducible analysis pipeline for the MAXOMOD project: Multiomic ALS signatures highlight sex differences and molecular subclusters and identify the MAPK pathway as therapeutic target
imsb-uke/ecarenet
imsb-uke/epigenetic-neural-glioblastoma
imsb-uke/dcsurv
Discrete Calibrated Survival
imsb-uke/discern
Deep Single Cell Expression ReconstructioN for improved cell clustering and cell subtype and state detection
imsb-uke/scaden
Repository of the Scaden tool for cell type deconvolution of RNA-seq data.
imsb-uke/TCRs-pMHC
Datasets containing CDR3 Beta sequences and peptide sequences, with a true label indication whether the combination binds or not.
imsb-uke/DeePSC
imsb-uke/DISSECT
Deep semi-supervised complete cell deconvolution https://imsb-uke.github.io/DISSECT/
imsb-uke/exsrrf_analyses
imsb-uke/rna_augment
imsb-uke/bias-transfer-microscopy
A repository containing the code for the paper "Deep learning-based bias transfer for medical immunofluorescent microscopy images"
imsb-uke/podometric_u_net
Deep learning-based molecular morphometrics for kidney biopsies
imsb-uke/ANCA-GN_transcriptomics
Contains code to analyse ANCA data
imsb-uke/deconvolution
Runs deconvolution methods included in the DISSECT manuscript