imsb-uke/scGAN

Providing cell-type labels instead of clustering

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Hello! I'm running scGAN and I was wondering if cell-type labels can be provided along with the dataset instead of using the default clustering scGAN has, as manually changing the resolution parameter of the clustering in order for the generated clusters to match with the original cell types is a bit overwhelming.

Thanks in advance!

EDIT: I just saw in the code that if the cell-types are provided and a 'None' is set to the res parameter it uses the provided ones. Thanks!